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Group:
Reptile
Estimated genome size:
10 - 20 cm (total body length)
Size:
10 - 20 cm (total body length)
Distribution:
Endemic to the Republic of South Africa, occurring in Little Namaqualand from Port Nolloth to Clanwilliam.
PromethION Sequencing Report:
Output:
48.66 Gigabases
Approximate N50:
5.93 kilobases
Draft Genome Assembly Statistics:
Genome Length:
1.56 Gigabases
BUSCO completeness score (single and duplicated genes):
98.8% [S: 96.9%, D: 2.0%]
Importance:
It serves as an important model species for studying specific stages of limb development within the genus Scelotes, representing an intermediate limb development stage (forelimb digits = 0; hindlimb digits = 2), and for investigating the genomic evolution of vertebrates. It has a restricted distribution and occurs in distinct habitats and regions, making it an excellent model species for biogeographic and molecular ecology studies.
Sample Contributor contact details:
Dr. Zhongning Zhao
University of Free State
Group:
Eudicot
Genome size:
1 120 million DNA base pairs (1.12 Gigabases)
Size:
5-15 m
Distribution:
The Wild Almond / Wilde Amandel is confined to the fynbos biome in mountain regions such as Gifberg, Klein Rivier, Riviersonderend Mountains and the eastern side of Table Mountain.
PromethION Sequencing Report:
Output:
41.27 Gigabases
Approximate N50:
20.1 kilobases
Assembly N50:
TBA
Contig number:
TBA
Draft Genome Assembly Statistics:
Assembler used:
TBA
Genome Length:
0.85 Gigabases
BUSCO completeness score (single and duplicated genes):
99.1%
BUSCO database:
TBA
Brabejum stellatifolium
Wild Almond
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Importance:
The fresh fruits are poisonous but can be used as a coffee substitute if processed correctly, which involves leaching out the poison – a skill learned from the Khoi.
Sample Contributor contact details:
Ernst Van Jaarsveld,
University of Western Cape | Babylonstoren
Date Published:
2024-06-12
Photo credit:
© M. Lilje
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