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Phylum:
Chordata
Estimated genome size:
Maximum length 50 cm
Organism size:
Maximum length 50 cm
Distribution:
Endemic to southern Africa, Labeo capensis is primarily found in the Orange-Vaal River system.
PromethION Sequencing Report:
Output:
13.8 Gigabases
Approximate N50:
5.49 kilobases
Draft Genome Assembly Statistics:
Genome Length:
1.1 Gigabases
BUSCO completeness score (single and duplicated genes):
98.8% [S: 94.9%, D: 3.9%]
Importance:
The Orange river mudfish is a freshwater species endemic to southern Africa. Human activities, such as inter-basin water transfers, have facilitated hybridisation with Moggel (Labeo umbratus). Genomic data are essential to clarify its phylogenetic placement and assess the extent of hybridisation. It is listed as Least Concern on the IUCN Red List. Labeo capensis is an occasional angling species, and it is also used in ecological and physiological research. Additionally, it holds potential as a commercial species in large impoundments.
Sample Contributor contact details:
Dr Gwynneth Matcher
South African Institute for Aquatic Biodiversity
Phylum:
Tracheophyta
Estimated genome size:
700 million DNA base pairs (0.7 Gigabases)
Organism size:
4 meters (height)
Distribution:
It grows naturally in coastal bush, costal forest and on sand dunes from the Eastern Cape, northwards to Kwazulu Natal and Mozambique. Today it is commonly grown in many countries abroad.
PromethION Sequencing Report:
Output:
205.9 Gigabases
Approximate N50:
18.07 kilobases
Draft Genome Assembly Statistics:
Genome Length:
0.47 Gigabases
BUSCO completeness score (single and duplicated genes):
98.8% [S:92.2%, D:6.6%]
Carissa macrocarpa
Grootnoemnoem
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Importance:
A fast-growing, wind resistant, impenetrable shrub that produces fruits which can be eaten raw or used to make jams and jellies.
Sample Contributor contact details:
Ernst Van Jaarsveld,
University of Western Cape | Babylonstoren
Date Published:
2024-06-12
Awaiting DOI
Photo credit:
© D.B. Montesinos-Tubée
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