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Group:
Eudicot
Estimated genome size:
0.3 meters in height.
Size:
0.3 meters in height.
Distribution:
Found in grassland habitats across Southern Africa.
PromethION Sequencing Report:
Output:
122.04 Gigabases
Approximate N50:
9.24 kilobases
Draft Genome Assembly Statistics:
Genome Length:
2.75 Gigabases
BUSCO completeness score (single and duplicated genes):
99.6% [S: 60.8%, D: 38.8%]
Importance:
Some populations of this species in the Barberton region of South Africa have evolved the ability to hyperaccumulate nickel, making this species ideal for a comparative genomics approach to understand the evolution of this extreme phenotype.
Group:
Eudicot
Genome size:
2390 Million DNA base pairs (2.39 Giga bases)
Size:
0.1 m
Distribution
Carpobrotus acinaciformis thrives in coastal loose sands and rocky outcrops across the Western Cape Province, ranging from Saldanha Bay to the Cape Peninsula and extending eastward to Mossel Bay. While native to South Africa, this species has also become naturalized in other regions worldwide.
PromethION Sequencing Report:
Output:
68.91 Gigabases
Approximate N50:
4.17 kilobases
Assembly N50:
TBA
Contig number:
TBA
Draft Genome Assembly Statistics:
Assembler used:
TBA
Genome Length:
653.21 Mb
BUSCO completeness score (single and duplicated genes):
98.5%
BUSCO database:
TBA
Carpobrotus acinaciformis
Suurvy
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Importance:
The Pink Sourfig bears edible fruits with notable medicinal properties, and is consumed orally to help treat tuberculosis and other pulmonary infections. Leaf juice is used topically on sores or burns and is an antiseptic. The leaf juice is believed to have diuretic effects and to aid in relieving dysentery. Both leaf and fruit preparations are taken internally to address heart conditions and used as a mouthwash or gargle to soothe sore throats and oral sores.
Sample Contributor contact details:
Ernst Van Jaarsveld,
University of Western Cape | Babylonstoren
Date Published:
2024-09-20
Photo credit:
© K. Barsakis
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