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Phylum:
Chordata
Estimated genome size:
Maximum length 50 cm
Organism size:
Maximum length 50 cm
Distribution:
Endemic to southern Africa, Labeo capensis is primarily found in the Orange-Vaal River system.
PromethION Sequencing Report:
Output:
13.8 Gigabases
Approximate N50:
5.49 kilobases
Draft Genome Assembly Statistics:
Genome Length:
1.1 Gigabases
BUSCO completeness score (single and duplicated genes):
98.8% [S: 94.9%, D: 3.9%]
Importance:
The Orange river mudfish is a freshwater species endemic to southern Africa. Human activities, such as inter-basin water transfers, have facilitated hybridisation with Moggel (Labeo umbratus). Genomic data are essential to clarify its phylogenetic placement and assess the extent of hybridisation. It is listed as Least Concern on the IUCN Red List. Labeo capensis is an occasional angling species, and it is also used in ecological and physiological research. Additionally, it holds potential as a commercial species in large impoundments.
Sample Contributor contact details:
Dr Gwynneth Matcher
South African Institute for Aquatic Biodiversity
Phylum:
Tracheophyta
Estimated genome size:
2390 Million DNA base pairs (2.39 Giga bases)
Organism size:
0.1 m
Distribution
Carpobrotus acinaciformis thrives in coastal loose sands and rocky outcrops across the Western Cape Province, ranging from Saldanha Bay to the Cape Peninsula and extending eastward to Mossel Bay. While native to South Africa, this species has also become naturalized in other regions worldwide.
PromethION Sequencing Report:
Output:
68.91 Gigabases
Approximate N50:
4.17 kilobases
Draft Genome Assembly Statistics:
Genome Length:
653.21 Mb
BUSCO completeness score (single and duplicated genes):
98.5%
Carpobrotus acinaciformis
Suurvy
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Importance:
The Pink Sourfig bears edible fruits with notable medicinal properties, and is consumed orally to help treat tuberculosis and other pulmonary infections. Leaf juice is used topically on sores or burns and is an antiseptic. The leaf juice is believed to have diuretic effects and to aid in relieving dysentery. Both leaf and fruit preparations are taken internally to address heart conditions and used as a mouthwash or gargle to soothe sore throats and oral sores.
Sample Contributor contact details:
Ernst Van Jaarsveld,
University of Western Cape | Babylonstoren
Date Published:
2024-09-20
Awaiting DOI
Photo credit:
© K. Barsakis
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