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Phylum:
Angiosperms
Estimated genome size:
1O meters (height)
Organism size:
1O meters (height)
Distribution:
Schotia brachypetala occurs in warm dry areas in bushveld, deciduous woodland and scrub forest most often on the banks of rivers and streams or on old termite mounds at lower altitudes from around Umtata in the Eastern Cape, through KwaZulu Natal, Swaziland, Mpumalanga, Northern Province and into Mozambique and Zimbabwe.
PromethION Sequencing Report:
Output:
86.11 Gigabases
Approximate N50:
12.38 kilobases
Draft Genome Assembly Statistics:
Genome Length:
1333.64 Gigabases
BUSCO completeness score (single and duplicated genes):
98.4% [S85.2%, D:13.2%]
Importance:
Schotia brachypetala an exceptional ornamental tree and has a number of other uses including medicine, food, timber and as a dye. The seeds are edible after roasting, and although low in fat and protein they have a high carbohydrate content. Both the Bantu-speaking people and the early European settlers and farmers are said to have roasted the mature pods and eaten the seeds, a practice which they learned from the Khoikhoi. The timber was chiefly used in wagon making.
Sample Contributor contact details
Thabang Makola
South African National Biodiversity Institute
Phylum:
Chordata
Estimated genome size:
80 Million DNA base pairs (0.8 Gb Giga bases)
Organism size:
47 cm
Distribution:
Angola-northern KwaZulu Natal, but previous study revealed a strong differentiation between Angola/Namibia and South African specimens.
PromethION Sequencing Report:
Output:
84.71 Gigabases
Approximate N50:
2.01 kilobases
Diplodus capensis
Blacktail
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Draft Genome Assembly Statistics:
Genome Length:
687.58 Mb
BUSCO completeness score (single and duplicated genes):
99.7% (S: 97.3%, D: 2.4%)
Importance:
It is one of the endemic species of South Africa, and it is currently caught by recreational and subsistence fishers.
Sample Contributor contact details
Dr Romina Henriques, University of Pretoria
Photo credit:
© T. Menut
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