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Group:
Reptile
Estimated genome size:
17 cm maximum (total body length).
Size:
17 cm maximum (total body length).
Distribution:
It is found in the Eastern Cape, Free State, Western Cape and Northern Cape
provinces of South Africa.
PromethION Sequencing Report:
Output:
89.36 Gigabases
Approximate N50:
6.51 kilobases
Draft Genome Assembly Statistics:
Genome Length:
4.53 Gigabases
BUSCO completeness score (single and duplicated genes):
99.6% [Single: 50.6%, Duplicated: 49%]
Importance:
The greater padloper tortoise is endemic to South Africa and contributes to ecosystem stability in the Karoo. As the largest species in the genus Homopus, it is of scientific interest for studies of limb development, as it is one of only two Homopus species with four digits on each foot.
Sample Contributor contact details:
Zhongning Zhao
University of the Free State
Group:
Eudicot
Estimated genome size:
Size:
Averages between 1.5 and 2 m in height.
Distribution:
This species historically occurred on the Cape Flats of the Cape Peninsula from the Black River to Zeekoeivlei. It has been reintroduced at three sites: Rondevlei between 2002 and 2005, Kenilworth Racecourse in 2006 and Tokai park in 2004.
PromethION Sequencing Report:
Output:
62.29 Gigabases
Approximate N50:
7.99 kilobases
Assembly N50:
210.03 kilobases
Contig number:
6 951
Draft Genome Assembly Statistics:
Assembler used:
Flye
Genome Length:
0.4 Gigabases
BUSCO completeness score (single and duplicated genes):
99.6% [S: 85.5%, D: 14.1%]
BUSCO database:
eukaryota
Erica verticillata
Whorl heath
Importance:
Erica verticillata is a critically endangered fynbos species once extinct in the wild and now reintroduced through conservation efforts. As part of the unique Cape Floristic Region, it plays a role in sustaining pollinators and ecosystem balance. Sequencing its genome can uncover genetic traits linked to its adaptability, inform restoration strategies, and enhance our understanding of plant resilience in fire-prone, nutrient poor habitats.
Date Published:
2025-08-27
Photo credit:
© B. du Preez
Flora
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