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Group:
Reptile
Estimated genome size:
10 - 20 cm (total body length)
Size:
10 - 20 cm (total body length)
Distribution:
Endemic to the Republic of South Africa, occurring in Little Namaqualand from Port Nolloth to Clanwilliam.
PromethION Sequencing Report:
Output:
48.66 Gigabases
Approximate N50:
5.93 kilobases
Draft Genome Assembly Statistics:
Genome Length:
1.56 Gigabases
BUSCO completeness score (single and duplicated genes):
98.8% [S: 96.9%, D: 2.0%]
Importance:
It serves as an important model species for studying specific stages of limb development within the genus Scelotes, representing an intermediate limb development stage (forelimb digits = 0; hindlimb digits = 2), and for investigating the genomic evolution of vertebrates. It has a restricted distribution and occurs in distinct habitats and regions, making it an excellent model species for biogeographic and molecular ecology studies.
Sample Contributor contact details:
Dr. Zhongning Zhao
University of Free State
Group:
Eudicot
Estimated genome size:
Size:
Averages between 1.5 and 2 m in height.
Distribution:
This species historically occurred on the Cape Flats of the Cape Peninsula from the Black River to Zeekoeivlei. It has been reintroduced at three sites: Rondevlei between 2002 and 2005, Kenilworth Racecourse in 2006 and Tokai park in 2004.
PromethION Sequencing Report:
Output:
62.29 Gigabases
Approximate N50:
7.99 kilobases
Assembly N50:
210.03 kilobases
Contig number:
6 951
Draft Genome Assembly Statistics:
Assembler used:
Flye
Genome Length:
0.4 Gigabases
BUSCO completeness score (single and duplicated genes):
99.6% [S: 85.5%, D: 14.1%]
BUSCO database:
eukaryota
Erica verticillata
Whorl heath
Importance:
Erica verticillata is a critically endangered fynbos species once extinct in the wild and now reintroduced through conservation efforts. As part of the unique Cape Floristic Region, it plays a role in sustaining pollinators and ecosystem balance. Sequencing its genome can uncover genetic traits linked to its adaptability, inform restoration strategies, and enhance our understanding of plant resilience in fire-prone, nutrient poor habitats.
Date Published:
2025-08-27
Photo credit:
© B. du Preez
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