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Group:
Eudicot
Estimated genome size:
Up to 18 m tall
Size:
Up to 18 m tall
Distribution:
The species is native to large parts of sub-Saharan Africa (including, but not limited to South Africa, Namibia, Botswana, Zimbabwe). In South Africa, it is found in Limpopo, Mpumalanga, KwaZulu Natal, North West and some parts of Northern and Eastern Cape.
PromethION Sequencing Report:
Output:
86.86 Gigabases
Approximate N50:
17.18 kilobases
Draft Genome Assembly Statistics:
Genome Length:
0.39 Gigabases
BUSCO completeness score (single and duplicated genes):
98.8% [S: 97.4%, D: 1.4%]
Importance:
Sclerocarya birrea is an economically and culturally important African tree, valued for products such as Amarula Cream Liqueur, cosmetic oil, and its traditional medicinal uses, while also supporting rural livelihoods. Its drought tolerant and deep rooting system make it important in agroforestry and ecosystem resilience. Sequencing its genome will improve understanding of its biology, support conservation and breeding efforts, and enhance sustainable commercial development.
Sample Contributor contact details:
Prof. Eshchar Mizrachi
University of Pretoria
Group:
Bony fish
Genome size:
1 560 million DNA base pairs (1.56 Gigabases)
Size:
Up to 50 centimeters in length
Distribution:
The Tugela labeo is Endemic to the Tugela River system in South Africa.
PromethION Sequencing Report:
Output:
34.69 Gigabases
Approximate N50:
6.08 kilobases
Assembly N50:
TBA
Contig number:
TBA
Draft Genome Assembly Statistics:
Assembler used:
TBA
Genome Length:
1.06 Gigabases
BUSCO completeness score (single and duplicated genes):
99.3% [S: 96.9%, D: 2.4%]
BUSCO database:
TBA
Labeo rubromaculatus
Tugela labeo
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Importance:
The Tugela labeo is a freshwater fish species endemic to South Africa. Currently listed as Vulnerable on the IUCN Red List, it is facing population decline due to a variety of recorded threats. It is primarily targeted in occasional recreational angling but also serves as an important species for subsistence fisheries in large dams and riverine habitats.
Sample Contributor contact details:
Dr Gwynneth Matcher
South African Institute for Aquatic Biodiversity
Date Published:
2025-03-12
Photo credit:
© R. Palmer
Fauna
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