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Phylum:
Chordata
Estimated genome size:
65 cm TL
Organism size:
65 cm TL
Distribution:
Endemic to South Africa from the mouth of the Orange river through to KwaZulu-Natal. Adults inhabit inshore marine environments to 25 m depth, usually over sandy or mixed sand and rock shorelines. Juveniles have an obligatory estuarine dependent nursery phase.
P2Solo Sequencing Report:
Output:
85.8 Gigabases
Approximate N50:
6,39 kilobases
Draft Genome Assembly Statistics:
Genome Length:
728,93 Mb
BUSCO completeness score (single and duplicated genes):
99,3%
Importance:
An important reactional and subsistence food fish. Listed as Endangered on the IUCN Redlist.
Phylum:
Chordata
Estimated genome size:
Unknown
Organism size:
4.5 cm TL (male)
Distribution:
The striped topminnow is widespread in southern Africa.
PromethION Sequencing Report:
Output:
25 Gigabases
Approximate N50:
3.7 kilobases
Lacustricola katangae
Striped topminnow
Draft Genome Assembly Statistics:
Genome Length:
1 Gigabase
BUSCO completeness score (single and duplicated genes):
92.2 %
Importance:
This is a commercially important aquarium fish. It is also harvested for consumption and for research. Considered Least Concern on IUCN Redlist. This is the first species in this genus to have its genome sequenced.
Photo credit:
© R. Bills
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