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Group:
Eudicot
Estimated genome size:
Up to 18 m tall
Size:
Up to 18 m tall
Distribution:
The species is native to large parts of sub-Saharan Africa (including, but not limited to South Africa, Namibia, Botswana, Zimbabwe). In South Africa, it is found in Limpopo, Mpumalanga, KwaZulu Natal, North West and some parts of Northern and Eastern Cape.
PromethION Sequencing Report:
Output:
86.86 Gigabases
Approximate N50:
17.18 kilobases
Draft Genome Assembly Statistics:
Genome Length:
0.39 Gigabases
BUSCO completeness score (single and duplicated genes):
98.8% [S: 97.4%, D: 1.4%]
Importance:
Sclerocarya birrea is an economically and culturally important African tree, valued for products such as Amarula Cream Liqueur, cosmetic oil, and its traditional medicinal uses, while also supporting rural livelihoods. Its drought tolerant and deep rooting system make it important in agroforestry and ecosystem resilience. Sequencing its genome will improve understanding of its biology, support conservation and breeding efforts, and enhance sustainable commercial development.
Sample Contributor contact details:
Prof. Eshchar Mizrachi
University of Pretoria
Group:
Bird
Estimated genome size:
Size:
70 cm (height) 125 cm (wingspan)
Distribution:
Prince Edward and Crozet Islands
PromethION Sequencing Report:
Output:
65.49 Gigabases
Approximate N50:
5.48 thousand bases (kilobases)
Assembly N50:
2 723.9 kilobases
Contig number:
3 739
Draft Genome Assembly Statistics:
Assembler used:
Flye
Genome Length:
1.22 Gigabases
BUSCO completeness score (single and duplicated genes):
98.8% [S: 98.0%, D: 0.8%]
BUSCO database:
eukaryota
Leucocarbo melanogenesis
Crozet shag
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Importance:
This species is critically endangered due to reduced breeding success and inhabits a relatively small geographic area. This genome will be used as a reference genome for future conservation genetics work.
Sample Contributor contact details:
Dr Monica Mwale
SANBI, Centre for Conservation Science
Date Published:
2025-10-14
Photo credit:
© A. Makhado
Fauna
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