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Group:
Reptile
Estimated genome size:
10 - 20 cm (total body length)
Size:
10 - 20 cm (total body length)
Distribution:
Endemic to the Republic of South Africa, occurring in Little Namaqualand from Port Nolloth to Clanwilliam.
PromethION Sequencing Report:
Output:
48.66 Gigabases
Approximate N50:
5.93 kilobases
Draft Genome Assembly Statistics:
Genome Length:
1.56 Gigabases
BUSCO completeness score (single and duplicated genes):
98.8% [S: 96.9%, D: 2.0%]
Importance:
It serves as an important model species for studying specific stages of limb development within the genus Scelotes, representing an intermediate limb development stage (forelimb digits = 0; hindlimb digits = 2), and for investigating the genomic evolution of vertebrates. It has a restricted distribution and occurs in distinct habitats and regions, making it an excellent model species for biogeographic and molecular ecology studies.
Sample Contributor contact details:
Dr. Zhongning Zhao
University of Free State
Group:
Eudicot
Genome size:
1120 million DNA base pairs (1.12G Gigabases)
Size:
1 meter (height)
Distribution:
Leucospermum cuneiforme grows on sandstone slopes and flats in the Western Cape and Eastern Cape, from sea level to 1000 m, from Greyton in the Caledon district, along the southern and eastern coastal belt and adjacent mountain ranges, to the Riviersonderend, Potberg, Langeberg, Outeniqua and Swartberg Mountains.
PromethION Sequencing Report:
Output:
28.34 Gigabases
Approximate N50:
14.49 kilobases
Assembly N50:
TBA
Contig number:
TBA
Draft Genome Assembly Statistics:
Assembler used:
TBA
Genome Length:
0.54 Gigabases
BUSCO completeness score (single and duplicated genes):
98.6% [S:88.2%, D:10.4%]
BUSCO database:
TBA
Leucospermum cuneiforme
Wart-stemmed Pincushion
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Importance:
Leucospermum sp belong to the Proteaceae family, a characteristic part of the Cape Floristic Region and an important member of South Africa's indigenous floriculture industry. On the one hand sustaining biodiversity and on the other creating jobs and earning international value on export of flowers. Leucospermum cuineiforme is currently part of a molecular marker development project.
Sample Contributor contact details:
Louisa Blomerus
Agricultural Research Council
Date Published:
2025-01-19
Photo credit:
© L. Blomerus
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