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Group:
Eudicot
Estimated genome size:
0.3 meters in height.
Size:
0.3 meters in height.
Distribution:
Found in grassland habitats across Southern Africa.
PromethION Sequencing Report:
Output:
122.04 Gigabases
Approximate N50:
9.24 kilobases
Draft Genome Assembly Statistics:
Genome Length:
2.75 Gigabases
BUSCO completeness score (single and duplicated genes):
99.6% [S: 60.8%, D: 38.8%]
Importance:
Some populations of this species in the Barberton region of South Africa have evolved the ability to hyperaccumulate nickel, making this species ideal for a comparative genomics approach to understand the evolution of this extreme phenotype.
Group:
Bony fish
Genome size:
758 Million DNA base pairs (0,758 Gigabases)
Size:
40 cm SL (male)
Distribution:
The east African spiny eel is distributed in southern Africa from the Lake Victoria basin in Uganda and Kenya, the Congo River basin in the Democratic Republic of Congo, southwards through to the Zambezi system in Namibia and Botswana.
PromethION Sequencing Report:
Output:
5,45 kilobases
Approximate N50:
18,2 Gigabases
Assembly N50:
TBA
Contig number:
TBA
Draft Genome Assembly Statistics:
Assembler used:
TBA
Genome Length:
0,58 Gigabases
BUSCO completeness score (single and duplicated genes):
99,6%
BUSCO database:
TBA
Mastacembelus frenatus
East African spiny eel
Importance:
This species is used for human consumption but is listed as Least Concern on the IUCN Redlist. This is the first species in the genome to have its genome sequenced.
Sample Contributor contact details:
Dr Gwynneth Matcher
South African Institute for Aquatic Biodiversity
Date Published:
2024-05-07
Photo credit:
© Okavango Wilderness Project
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