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Group:
Reptile
Estimated genome size:
17 cm maximum (total body length).
Size:
17 cm maximum (total body length).
Distribution:
It is found in the Eastern Cape, Free State, Western Cape and Northern Cape
provinces of South Africa.
PromethION Sequencing Report:
Output:
89.36 Gigabases
Approximate N50:
6.51 kilobases
Draft Genome Assembly Statistics:
Genome Length:
4.53 Gigabases
BUSCO completeness score (single and duplicated genes):
99.6% [Single: 50.6%, Duplicated: 49%]
Importance:
The greater padloper tortoise is endemic to South Africa and contributes to ecosystem stability in the Karoo. As the largest species in the genus Homopus, it is of scientific interest for studies of limb development, as it is one of only two Homopus species with four digits on each foot.
Sample Contributor contact details:
Zhongning Zhao
University of the Free State
Group:
Mammal
Genome size:
2.64 million DNA base pairs (2.64 Gigabases)
Size:
80-120 cm
Distribution:
Majority of Zulu sheep are kept kept by rural farmers in the Kwa-Zulu
Natal province of South Africa as a source for income and affordable
protein.
PromethION Sequencing Report:
Output:
60.89 Gigabases
Approximate N50:
12.1 kilobases
Assembly N50:
TBA
Contig number:
TBA
Draft Genome Assembly Statistics:
Assembler used:
TBA
Genome Length:
2.64 Gigabases
BUSCO completeness score (single and duplicated genes):
98.8%
BUSCO database:
TBA
Ovis aries
Zulu Sheep
Importance:
Zulu Sheep developed unique and specific adaptative traits to local Southern African environments including tolerance to hot and humid conditions, tolerance to local internal and external parasites, endurance, and is immune to most local disease.
Date Published:
2024-05-07
Photo credit:
© S. Ngcobo
Fauna
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