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Phylum:

Chordata

Estimated genome size:

Maximum length 50 cm

Organism size:

Maximum length 50 cm

Distribution:

Endemic to southern Africa, Labeo capensis is primarily found in the Orange-Vaal River system.

PromethION Sequencing Report:

Output:

13.8 Gigabases

Approximate N50:

5.49 kilobases

Draft Genome Assembly Statistics:

Genome Length:

1.1 Gigabases

BUSCO completeness score (single and duplicated genes):

98.8% [S: 94.9%, D: 3.9%]

Importance:

The Orange river mudfish is a freshwater species endemic to southern Africa. Human activities, such as inter-basin water transfers, have facilitated hybridisation with Moggel (Labeo umbratus). Genomic data are essential to clarify its phylogenetic placement and assess the extent of hybridisation. It is listed as Least Concern on the IUCN Red List. Labeo capensis is an occasional angling species, and it is also used in ecological and physiological research. Additionally, it holds potential as a commercial species in large impoundments.

Sample Contributor contact details:

Dr Gwynneth Matcher
South African Institute for Aquatic Biodiversity

Phylum:

Chordata

Estimated genome size:

2.64 million DNA base pairs (2.64 Gigabases)

Organism size:

80-120 cm

Distribution:

Majority of Zulu sheep are kept kept by rural farmers in the Kwa-Zulu
Natal province of South Africa as a source for income and affordable
protein.

PromethION Sequencing Report:

Output:

60.89 Gigabases

Approximate N50:

12.1 kilobases

Draft Genome Assembly Statistics:

Genome Length:

2.64 Gigabases

BUSCO completeness score (single and duplicated genes):

98.8%

Ovis aries

Zulu Sheep

Species Card Details

Importance:

Zulu Sheep developed unique and specific adaptative traits to local Southern African environments including tolerance to hot and humid conditions, tolerance to local internal and external parasites, endurance, and is immune to most local disease.

Sample Contributor contact details:

Annelin Molotsi Stellenbosch University

Date Published:

2024-05-07

Awaiting DOI

Photo credit:

© S. Ngcobo

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