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Phylum:
Chordata
Estimated genome size:
Maximum length 50 cm
Organism size:
Maximum length 50 cm
Distribution:
Endemic to southern Africa, Labeo capensis is primarily found in the Orange-Vaal River system.
PromethION Sequencing Report:
Output:
13.8 Gigabases
Approximate N50:
5.49 kilobases
Draft Genome Assembly Statistics:
Genome Length:
1.1 Gigabases
BUSCO completeness score (single and duplicated genes):
98.8% [S: 94.9%, D: 3.9%]
Importance:
The Orange river mudfish is a freshwater species endemic to southern Africa. Human activities, such as inter-basin water transfers, have facilitated hybridisation with Moggel (Labeo umbratus). Genomic data are essential to clarify its phylogenetic placement and assess the extent of hybridisation. It is listed as Least Concern on the IUCN Red List. Labeo capensis is an occasional angling species, and it is also used in ecological and physiological research. Additionally, it holds potential as a commercial species in large impoundments.
Sample Contributor contact details:
Dr Gwynneth Matcher
South African Institute for Aquatic Biodiversity
Phylum:
Chordata
Estimated genome size:
2.64 million DNA base pairs (2.64 Gigabases)
Organism size:
80-120 cm
Distribution:
Majority of Zulu sheep are kept kept by rural farmers in the Kwa-Zulu
Natal province of South Africa as a source for income and affordable
protein.
PromethION Sequencing Report:
Output:
60.89 Gigabases
Approximate N50:
12.1 kilobases
Draft Genome Assembly Statistics:
Genome Length:
2.64 Gigabases
BUSCO completeness score (single and duplicated genes):
98.8%
Ovis aries
Zulu Sheep
Importance:
Zulu Sheep developed unique and specific adaptative traits to local Southern African environments including tolerance to hot and humid conditions, tolerance to local internal and external parasites, endurance, and is immune to most local disease.
Date Published:
2024-05-07
Awaiting DOI
Photo credit:
© S. Ngcobo
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