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Phylum:
Chordata
Estimated genome size:
3 – 4 meters
Organism size:
3 – 4 meters
Distribution:
Angola, Botswana, Cameroon, Central African Republic, Chad, The Democratic Republic of the Congo, Eritrea, Ethiopia, Kenya, Malawi, Mali, Mozambique, Namibia, Nigeria, Rwanda, Somalia, South Africa, South Sudan, United Republic of Tanzania, Uganda, Zambia, Zimbabwe.
PromethION Sequencing Report:
Output:
110.47 Gigabases
Approximate N50:
8.38 kilobases
Draft Genome Assembly Statistics:
Genome Length:
3.16 Gigabases
BUSCO completeness score (single and duplicated genes):
98.8% [S: 82.7%, D: 15.3%]
Importance:
African savanna elephants are the largest land animals and crucial ecosystem engineers. Listed as endangered by the IUCN Red list, they are vital for South African tourism. This project aims to sequence the genome of a wild bull elephant from a native KZN population, providing valuable genetic data beyond existing zoo based or outdated sequences.
Sample Contributor contact details
Dr Carel J. Oosthuizen
University of Pretoria
Phylum:
Magnoliopsida
Estimated genome size:
768 Million DNA base pairs (0,77 Gigabases)
Organism size:
5-30 cm
Distribution:
Blue sorrel is endemic to the Cape Floristic Region of South Africa, where it is common in the fynbos. It flowers from April to May.
PromethION Sequencing Report:
Output:
35 Gigabases
Approximate N50:
9.7 kilobases
Draft Genome Assembly Statistics:
Genome Length:
0,4 Gigabases
BUSCO completeness score (single and duplicated genes):
100%
Oxalis livida
Blue sorrel
Importance:
The Blue sorrel and relatives form an evolutionarily isolated lineage in African Oxalis. The attractive plants are also used in horticulture.
Sample Contributor contact details
Dr Kenneth Oberlander
University of Pretoria
Date Published
2024-5-7
Photo credit:
© Nick Helme
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