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Group:
Reptile
Estimated genome size:
17 cm maximum (total body length).
Size:
17 cm maximum (total body length).
Distribution:
It is found in the Eastern Cape, Free State, Western Cape and Northern Cape
provinces of South Africa.
PromethION Sequencing Report:
Output:
89.36 Gigabases
Approximate N50:
6.51 kilobases
Draft Genome Assembly Statistics:
Genome Length:
4.53 Gigabases
BUSCO completeness score (single and duplicated genes):
99.6% [Single: 50.6%, Duplicated: 49%]
Importance:
The greater padloper tortoise is endemic to South Africa and contributes to ecosystem stability in the Karoo. As the largest species in the genus Homopus, it is of scientific interest for studies of limb development, as it is one of only two Homopus species with four digits on each foot.
Sample Contributor contact details:
Zhongning Zhao
University of the Free State
Group:
Eudicot
Genome size:
768 million DNA base pairs (0.76 Gigabases)
Size:
5cm - 20cm
Distribution:
Winter rainfall area of southern Africa, from Namibia to the Eastern
Cape.
PromethION Sequencing Report:
Output:
124.99 Gigabases
Approximate N50:
7.05 kilobases
Assembly N50:
TBA
Contig number:
TBA
Draft Genome Assembly Statistics:
Assembler used:
TBA
Genome Length:
0.31 Gigabases
BUSCO completeness score (single and duplicated genes):
99.2%
BUSCO database:
TBA
Oxalis obtusa
Reverse Sorrel
Importance:
One of the most widespread South African Oxalis, this highly variable species has great but underexplored horticultural potential. The flower and leaf stalks are covered with reversed, downward-pointing hairs, and flower colour varies from brick red to pale orange, yellow, pink and white.
Sample Contributor contact details:
Dr Kenneth Oberlander
University of Pretoria
Date Published:
2024-05-07
Photo credit:
© K. Oberlander
Flora
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