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Group:
Eudicot
Estimated genome size:
Up to 18 m tall
Size:
Up to 18 m tall
Distribution:
The species is native to large parts of sub-Saharan Africa (including, but not limited to South Africa, Namibia, Botswana, Zimbabwe). In South Africa, it is found in Limpopo, Mpumalanga, KwaZulu Natal, North West and some parts of Northern and Eastern Cape.
PromethION Sequencing Report:
Output:
86.86 Gigabases
Approximate N50:
17.18 kilobases
Draft Genome Assembly Statistics:
Genome Length:
0.39 Gigabases
BUSCO completeness score (single and duplicated genes):
98.8% [S: 97.4%, D: 1.4%]
Importance:
Sclerocarya birrea is an economically and culturally important African tree, valued for products such as Amarula Cream Liqueur, cosmetic oil, and its traditional medicinal uses, while also supporting rural livelihoods. Its drought tolerant and deep rooting system make it important in agroforestry and ecosystem resilience. Sequencing its genome will improve understanding of its biology, support conservation and breeding efforts, and enhance sustainable commercial development.
Sample Contributor contact details:
Prof. Eshchar Mizrachi
University of Pretoria
Group:
Fungi
Genome size:
35 million DNA base pairs (0.035 Gigabases)
Size:
Flamentous fungus
Distribution:
South Africa
PromethION Sequencing Report:
Output:
2.31 Gigabases
Approximate N50:
2.44 kilobases
Assembly N50:
TBA
Contig number:
TBA
Draft Genome Assembly Statistics:
Assembler used:
TBA
Genome Length:
0.036 Gigabases (36.1 million bases)
BUSCO completeness score (single and duplicated genes):
98.8% [S: 97.6%, D: 1.2%]
BUSCO database:
TBA
Penicillium limpopoense
Fungi
Importance:
The species was recently described from a litchi collected in South Africa.
Sample Contributor contact details:
Cobus Visagie
Forestry and Agricultural Biotechnology Institute
University of Pretoria
Date Published:
2025-03-12
Photo credit:
© C. Visagie
Fungi
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