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Phylum:
Chordata
Estimated genome size:
Maximum length 50 cm
Organism size:
Maximum length 50 cm
Distribution:
Endemic to southern Africa, Labeo capensis is primarily found in the Orange-Vaal River system.
PromethION Sequencing Report:
Output:
13.8 Gigabases
Approximate N50:
5.49 kilobases
Draft Genome Assembly Statistics:
Genome Length:
1.1 Gigabases
BUSCO completeness score (single and duplicated genes):
98.8% [S: 94.9%, D: 3.9%]
Importance:
The Orange river mudfish is a freshwater species endemic to southern Africa. Human activities, such as inter-basin water transfers, have facilitated hybridisation with Moggel (Labeo umbratus). Genomic data are essential to clarify its phylogenetic placement and assess the extent of hybridisation. It is listed as Least Concern on the IUCN Red List. Labeo capensis is an occasional angling species, and it is also used in ecological and physiological research. Additionally, it holds potential as a commercial species in large impoundments.
Sample Contributor contact details:
Dr Gwynneth Matcher
South African Institute for Aquatic Biodiversity
Phylum:
Magnoliophyta
Estimated genome size:
391 million DNA base pairs (0.391 Gigabases)
Organism size:
5-10 cm
Distribution:
Coastal regions of the Western Cape from Onrus to Stilbaai and confined to sunny, rocky and sandy seashores.
PromethION Sequencing Report:
Output:
81.28 Gigabases
Approximate N50:
9.52 kilobases
Draft Genome Assembly Statistics:
Genome Length:
0.53 Gigabases
BUSCO completeness score (single and duplicated genes):
99.3%
Prenia vanrensburgii
African Spinach
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Importance:
The soft fleshy leaves of the African Spinach / Seepampoen / Cape spinach are edible, and delicious when prepared in a stew, like spinach. First used by the Khoi and San.
Sample Contributor contact details:
Ernst Van Jaarsveld,
University of Western Cape | Babylonstoren
Date Published:
2024-06-12
Awaiting DOI
Photo credit:
© C. Whitehouse
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