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Group:

Eudicot

Estimated genome size:

0.3 meters in height.

Size:

0.3 meters in height.

Distribution:

Found in grassland habitats across Southern Africa.

PromethION Sequencing Report:

Output:

122.04 Gigabases

Approximate N50:

9.24 kilobases

Draft Genome Assembly Statistics:

Genome Length:

2.75 Gigabases

BUSCO completeness score (single and duplicated genes):

99.6% [S: 60.8%, D: 38.8%]

Importance:

Some populations of this species in the Barberton region of South Africa have evolved the ability to hyperaccumulate nickel, making this species ideal for a comparative genomics approach to understand the evolution of this extreme phenotype.

Sample Contributor contact details:

Prof. Robert Ingle
University of Cape Town

Group:

Eudicot

Genome size:

60 Million DNA base pairs (0.597 Giga bases)

Size:

3-7 m

Distribution:

This wild grape can be found starting from the Cape Peninsula, where it thrives in the ravines on the eastern slopes of Table Mountain. It extends along the coastline in a narrow band through the Eastern Cape, continuing up to northern KwaZulu-Natal, and then moves inland through Mpumalanga into Limpopo Province, Zimbabwe, and Malawi. It is typically found near forests and grows along river edges, climbing over trees and shrubs.

PromethION Sequencing Report:

Output:

13.04 Gigabases

Approximate N50:

18.05 kilobases

Assembly N50:

TBA

Contig number:

TBA

Draft Genome Assembly Statistics:

Assembler used:

TBA

Genome Length:

583.24 Mb

BUSCO completeness score (single and duplicated genes):

98.8%

BUSCO database:

TBA

Rhoicissus tomentosa

Wild Grape

Species Card Details

Importance:

The acidic fruits are edible and pleasant tasting but should be eaten in moderation. Fruits can be used to make jams, jelly, wine and vinegar. The poisonous tuberous rootstock is used in traditional medicine. When boiled in milk it can be used to expel intestinal worms in calves and is also used to facilitate delivery during pregnancy.

Sample Contributor contact details:

Ernst Van Jaarsveld,
University of Western Cape | Babylonstoren

Date Published:

2024-09-20

Awaiting DOI

Photo credit:

© K. Barsakis

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