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Phylum:
Chordata
Estimated genome size:
Maximum length 50 cm
Organism size:
Maximum length 50 cm
Distribution:
Endemic to southern Africa, Labeo capensis is primarily found in the Orange-Vaal River system.
PromethION Sequencing Report:
Output:
13.8 Gigabases
Approximate N50:
5.49 kilobases
Draft Genome Assembly Statistics:
Genome Length:
1.1 Gigabases
BUSCO completeness score (single and duplicated genes):
98.8% [S: 94.9%, D: 3.9%]
Importance:
The Orange river mudfish is a freshwater species endemic to southern Africa. Human activities, such as inter-basin water transfers, have facilitated hybridisation with Moggel (Labeo umbratus). Genomic data are essential to clarify its phylogenetic placement and assess the extent of hybridisation. It is listed as Least Concern on the IUCN Red List. Labeo capensis is an occasional angling species, and it is also used in ecological and physiological research. Additionally, it holds potential as a commercial species in large impoundments.
Sample Contributor contact details:
Dr Gwynneth Matcher
South African Institute for Aquatic Biodiversity
Phylum:
Angiosperms
Estimated genome size:
Unknown
Organism size:
0.6 – 1.5 meters in height
Distribution:
The blushing bride occurs close to Franschhoek on mountain slopes in soils derived from granite. It is Critically Endangered as it is threatened by alien invasive species such as hakea and pines. Too frequent fires are a critical threat to the remaining wild populations, as immature plants are not given enough time to produce seeds that will rejuvenate the underground seed bank.
PromethION Sequencing Report:
Output:
6.6 Gigabases
Approximate N50:
7.87 kilobases
Draft Genome Assembly Statistics:
Genome Length:
0.49 Gigabases (487.2 million bases)
BUSCO completeness score (single and duplicated genes):
96.5% [S: 85.9%, D: 10.6%]
Serruria florida
Blushing bride
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Importance:
The blushing bride is one of the most delicate members of the Proteaceae family Serruria has grown into an important member of the indigenous floriculture industry of South Africa. On the one hand the conservation of this endangered member is critical, but on the other the delicate flowers are creating jobs and earning international valuta on export of flowers.
Sample Contributor contact details:
Louisa Blomerus
Crop Development, Agricultural Research Council
Date Published:
2025-03-12
Photo credit:
© L. Blomerus
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