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Phylum:
Chordata
Estimated genome size:
Maximum length 50 cm
Organism size:
Maximum length 50 cm
Distribution:
Endemic to southern Africa, Labeo capensis is primarily found in the Orange-Vaal River system.
PromethION Sequencing Report:
Output:
13.8 Gigabases
Approximate N50:
5.49 kilobases
Draft Genome Assembly Statistics:
Genome Length:
1.1 Gigabases
BUSCO completeness score (single and duplicated genes):
98.8% [S: 94.9%, D: 3.9%]
Importance:
The Orange river mudfish is a freshwater species endemic to southern Africa. Human activities, such as inter-basin water transfers, have facilitated hybridisation with Moggel (Labeo umbratus). Genomic data are essential to clarify its phylogenetic placement and assess the extent of hybridisation. It is listed as Least Concern on the IUCN Red List. Labeo capensis is an occasional angling species, and it is also used in ecological and physiological research. Additionally, it holds potential as a commercial species in large impoundments.
Sample Contributor contact details:
Dr Gwynneth Matcher
South African Institute for Aquatic Biodiversity
Phylum:
Angiosperms
Estimated genome size:
Unknown
Organism size:
0.6 – 1 meter in height
Distribution:
The Rose spiderhead’s natural distribution is from the Du Toitskloof to the
Riviersonderend Mountains, with an area of occurrence of about 51 km².
PromethION Sequencing Report:
Output:
6.6 Gigabases
Approximate N50:
13.76 kilobases
Draft Genome Assembly Statistics:
Genome Length:
0.51 Gigabases (487.2 million bases)
BUSCO completeness score (single and duplicated genes):
96.7% [S: 87.5%, D: 9.2%]
Serruria rosea
Rose spiderhead
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Importance:
The Rose spiderhead is one of the most delicate members of the Proteaceae family. It is classified as Near Threatened, so does not currently qualify for any of the threat categories. Due to possible future threats from afforestation, invasive alien plants and susceptibility to drought it may become threatened. Serruria has grown into an important member of the indigenous floriculture industry of South Africa. It is also used in the pot plant industry due to its compact size.
Sample Contributor contact details:
Louisa Blomerus
Crop Development, Agricultural Research Council
Date Published:
2025-03-12
Photo credit:
© L. Blomerus
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