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Phylum:
Chordata
Estimated genome size:
3 – 4 meters
Organism size:
3 – 4 meters
Distribution:
Angola, Botswana, Cameroon, Central African Republic, Chad, The Democratic Republic of the Congo, Eritrea, Ethiopia, Kenya, Malawi, Mali, Mozambique, Namibia, Nigeria, Rwanda, Somalia, South Africa, South Sudan, United Republic of Tanzania, Uganda, Zambia, Zimbabwe.
PromethION Sequencing Report:
Output:
110.47 Gigabases
Approximate N50:
8.38 kilobases
Draft Genome Assembly Statistics:
Genome Length:
3.16 Gigabases
BUSCO completeness score (single and duplicated genes):
98.8% [S: 82.7%, D: 15.3%]
Importance:
African savanna elephants are the largest land animals and crucial ecosystem engineers. Listed as endangered by the IUCN Red list, they are vital for South African tourism. This project aims to sequence the genome of a wild bull elephant from a native KZN population, providing valuable genetic data beyond existing zoo based or outdated sequences.
Sample Contributor contact details
Dr Carel J. Oosthuizen
University of Pretoria
Phylum:
Chordata
Estimated genome size:
78 Million DNA base pairs (0,782 Gb Giga bases)
Organism size:
70 cm TL
Distribution:
Endemic to South Africa from the Cape of Good Hope through to KwaZulu-Natal. Inhabits shallow coastal waters, mainly off rocky shores down to 80 m depth.
PromethION Sequencing Report:
Output:
71,03 Gigabases
Approximate N50:
4,46 kilobases
Draft Genome Assembly Statistics:
Genome Length:
760,22 Mb
BUSCO completeness score (single and duplicated genes):
99,3%
Sparodon durbanensis
Musselcracker
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Importance:
An important for target species in recreational fishing (both shore and spear fishing). The fish is edible and captured primarily for subsistence fishing. Listed as Near Threatened on the IUCN Redlist.
Date Published
2024-10-30
Photo credit:
© L Swart
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