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Group:
Eudicot
Estimated genome size:
Up to 18 m tall
Size:
Up to 18 m tall
Distribution:
The species is native to large parts of sub-Saharan Africa (including, but not limited to South Africa, Namibia, Botswana, Zimbabwe). In South Africa, it is found in Limpopo, Mpumalanga, KwaZulu Natal, North West and some parts of Northern and Eastern Cape.
PromethION Sequencing Report:
Output:
86.86 Gigabases
Approximate N50:
17.18 kilobases
Draft Genome Assembly Statistics:
Genome Length:
0.39 Gigabases
BUSCO completeness score (single and duplicated genes):
98.8% [S: 97.4%, D: 1.4%]
Importance:
Sclerocarya birrea is an economically and culturally important African tree, valued for products such as Amarula Cream Liqueur, cosmetic oil, and its traditional medicinal uses, while also supporting rural livelihoods. Its drought tolerant and deep rooting system make it important in agroforestry and ecosystem resilience. Sequencing its genome will improve understanding of its biology, support conservation and breeding efforts, and enhance sustainable commercial development.
Sample Contributor contact details:
Prof. Eshchar Mizrachi
University of Pretoria
Group:
Eudicot
Genome size:
1.5 Billion DNA base pairs
Size:
3-10 m
Distribution:
The Blinkblaar-wag-’n bietjie also known as the buffalo thorn is found throughout the summer rainfall regions of sub Saharan Africa. It thrives in temperate and tropical climates, particularly in areas with thorny vegetation. This versatile tree occupies diverse habitats and its presence often indicates underground water sources.
PromethION Sequencing Report:
Output:
82.39 Gigabases
Approximate N50:
5.37 kilobases
Assembly N50:
TBA
Contig number:
TBA
Draft Genome Assembly Statistics:
Assembler used:
TBA
Genome Length:
310.61 Mb
BUSCO completeness score (single and duplicated genes):
99%
BUSCO database:
TBA
Ziziphus mucronata
Blinkblaar-wag-’n-bietjie
Importance:
Buffalo thorn's flowers, leaves and berries are used as foodsources by bees, various bird species, and wild and domestic animals. Humans have used the berries to make porridge, coffee substitute and beer. The different tissues are important to treat a range of medical conditions such as pain, respiratory issues, skin infections and snake bites in East Africa. It also plays an important role in cultural activities such as burial rites and the wood is very useful as a timber source.
Sample Contributor contact details:
Ernst Van Jaarsveld,
University of Western Cape | Babylonstoren
Date Published:
2024-09-13
Photo credit:
© H. de Lange
Flora
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